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Glycine N ‐Acyltransferase Deficiency due to a Homozygous Nonsense Variant in the GLYAT : A Novel Inborn Error of Metabolism

  • The enzyme glycine N-acyltransferase (GLYAT) plays a crucial role in detoxifying both xenobiotic and endogenous compounds that contain a carboxylic acid group, such as benzoic acid. Data on the impact of human GLYAT on the glycine conjugation pathway is limited and difficult to determine. In this study, we present a 5.7-year-old girl with gross motor delay first noticed at age 5 months and speech delay evident at the time of diagnosis. To the best of our knowledge, no case of GLYAT enzyme deficiency has been reported to date. Whole exome sequencing (WES) identified a homozygous nonsense variant (NM_201648.3: c.322C>T: p.(Q108Ter)) in the GLYAT that abolished GLYAT activity in vitro. The detected variant was confirmed by Sanger sequencing. The patient was treated with pantothenic acid and a mitochondrial cocktail consisting of coenzyme Q10, vitamins B1, B2, B6, B12, C, folate, and carnitine, together with a low-protein diet, which led to the alleviation of edema and hypotonia and an improvement in her motor function and social interactions. Her serum glycine level was also normalized. This case identifies a novel homozygous nonsense variant in the GLYAT, leading to glycine N-acyltransferase enzyme deficiency and associated developmental delays.

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Metadaten
Document Type:Article
Language:English
Author:Mona Nourbakhsh, Mohammad Miryounesi, Ali Tale, Parvaneh Karimzadeh, Hossein Sadeghi, Mohammad‐Reza Ghasemi, Nasrin Alipour, Elham Pourbakhtyaran, Nakisa Hooman, Maryam Razzaghy‐AzarORCiD, Mitra NourbakhshORCiD, Lil Klaas, Daniel Schulke, Jörn Oliver Sass
Parent Title (English):JIMD Reports
Volume:66
Issue:5
Article Number:e70032
Number of pages:7
ISSN:2192-8304
URN:urn:nbn:de:hbz:1044-opus-91300
DOI:https://doi.org/10.1002/jmd2.70032
PMID:https://pubmed.ncbi.nlm.nih.gov/40747359
Publisher:John Wiley & Sons Ltd
Publishing Institution:Hochschule Bonn-Rhein-Sieg
Date of first publication:2025/07/29
License/ Rightsstatement:© 2025 The Author(s). JIMD Reports published by John Wiley & Sons Ltd on behalf of SSIEM. This is an open access article under the terms of the Creative Commons Attribution License
Funding:This work was supported by Deutsche Forschungsgemeinschaft, 514177501, 528562393, 538669957.
Tag:glycine N-acyltransferase deficiency; hyperglycinemia; neurometabolic disorder
Departments, institutes and facilities:Fachbereich Angewandte Naturwissenschaften
Institut für funktionale Gen-Analytik (IFGA)
Projects:Analyseplattform für molekulare Mechanismen und zelluläre Funktionen (DE/DFG/514177501)
CytoTransport - Mechanismen und Modulation zellulärer Transportprozesse (DE/DFG/528562393)
Störungen des menschlichen Valin-Katabolismus‘ - Schlüsselmetabolite und Pathomechanismen (DE/DFG/538669957)
Dewey Decimal Classification (DDC):6 Technik, Medizin, angewandte Wissenschaften / 61 Medizin und Gesundheit / 610 Medizin und Gesundheit
Entry in this database:2025/08/05
Licence (German):License LogoCreative Commons - CC BY - Namensnennung 4.0 International