Open Access

In an effort to assist researchers in choosing basis sets for quantum mechanical modeling of molecules (i.e. balancing calculation cost versus desired accuracy), we present a systematic study on the accuracy of computed conformational relative energies and their geometries in comparison to MP2/CBS and MP2/AV5Z data, respectively. In order to do so, we introduce a new nomenclature to unambiguously indicate how a CBS extrapolation was computed. Nineteen minima and transition states of buta-1,3-diene, propan-2-ol and the water dimer were optimized using forty-five different basis sets. Specifically, this includes one Pople (i.e. 6-31G(d)), eight Dunning (i.e. VXZ and AVXZ, X=2-5), twenty-five Jensen (i.e. pc-n, pcseg-n, aug-pcseg-n, pcSseg-n and aug-pcSseg-n, n=0-4) and nine Karlsruhe (e.g. def2-SV(P), def2-QZVPPD) basis sets. The molecules were chosen to represent both common and electronically diverse molecular systems. In comparison to MP2/CBS relative energies computed using the largest Jensen basis sets (i.e. n=2,3,4), the use of smaller sizes (n=0,1,2 and n=1,2,3) provides results that are within 0.11--0.24 and 0.09-0.16 kcal/mol. To practically guide researchers in their basis set choice, an equation is introduced that ranks basis sets based on a user-defined balance between their accuracy and calculation cost. Furthermore, we explain why the aug-pcseg-2, def2-TZVPPD and def2-TZVP basis sets are very suitable choices to balance speed and accuracy.

The paper presents the topological reduction method applied to gas transport networks, using contraction of series, parallel and tree-like subgraphs. The contraction operations are implemented for pipe elements, described by quadratic friction law. This allows significant reduction of the graphs and acceleration of solution procedure for stationary network problems. The algorithm has been tested on several realistic network examples. The possible extensions of the method to different friction laws and other elements are discussed.

Atmospheric aerosols affect the power production of solar energy systems. Their impact depends on both the atmospheric conditions and the solar technology employed. By being a region with a lack in power production and prone to high solar insolation, West Africa shows high potential for the application of solar power systems. However, dust outbreaks, containing high aerosol loads, occur especially in the Sahel, located between the Saharan desert in the north and the Sudanian Savanna in the south. They might affect the whole region for several days with significant effects on power generation. This study investigates the impact of atmospheric aerosols on solar energy production for the example year 2006 making use of six well instrumented sites in West Africa. Two different solar power technologies, a photovoltaic (PV) and a parabolic through (PT) power plant, are considered. The daily reduction of solar power due to aerosols is determined over mostly clear-sky days in 2006 with a model chain combining radiative transfer and technology specific power generation. For mostly clear days the local daily reduction of PV power (at alternating current) (PVAC) and PT power (PTP) due to the presence of aerosols lies between 13 % and 22 % and between 22 % and 37 %, respectively. In March 2006 a major dust outbreak occurred, which serves as an example to investigate the impact of an aerosol extreme event on solar power. During the dust outbreak, daily reduction of PVAC and PTP of up to 79 % and 100 % occur with a mean reduction of 20 % to 40 % for PVAC and of 32 % to 71 % for PTP during the 12 days of the event.

Pseudopotential (PP)-basierte Lattice-Boltzmann-Methoden werden zunehmend für die Simulation von Mehrphasenströmungen eingesetzt. Da sie auf einem phänomenologischen Ansatz basieren, ist ihr Einsatz mit einem hohen Modellierungsaufwand verbunden. Zudem entstehen an den Phasengrenzen sogenannte Scheingeschwindigkeiten, welche Genauigkeit und numerische Stabilität beeinträchtigen. Daher werden PP-Modelle in dieser Arbeit um drei neue Aspekte erweitert. Erstens wird gezeigt, dass bei der Modellierung unterschiedlicher Kontaktwinkel mit gängigen Methoden in Kombination mit verbesserten Kräfteschemata Scheintröpfchen entstehen. Diese werden durch einen neuartigen Ansatz eliminiert, der auf zusätzlichen Randbedingungen für alle Wechselwirkungskräfte basiert. Diese Technik verhindert nicht nur das Auftreten der Scheintröpfchen, sondern erhöht auch die Stabilität in wandgebundenen Strömungen. Zweitens wird ein neuartiges Verfahren zur Reduktion von Scheingeschwindigkeiten eingeführt. Dabei wird die Diskretisierung der Interaktionskräfte erweitert und die zusätzlichen, freien Koeffizienten in Simulationen statischer Tropfen numerisch optimiert. Die resultierende Diskretisierung wurde in Simulationen stationärer und dynamischer Testfälle validiert, wobei Scheingeschwindigkeiten deutlich reduziert werden konnten. Drittens und letztens wurden die Diffusionseigenschaften in Mehrstoffsystemen detailliert untersucht, wobei eine kritische Abhängigkeit zwischen den makroskopischen Diffusionskoeffizienten und dem Kräfteschema aufgezeigt wird. Diese Analyse bildet die Grundlage für den Vergleich und die zukünftige Entwicklung neuer Potentialfunktionen (für Mehrstoffsysteme) und reduziert den Modellierungsaufwand.

Herein we report an update to ACPYPE, a Python3 tool that now properly converts AMBER to GROMACS topologies for force fields that utilize nondefault and nonuniform 1–4 electrostatic and nonbonded scaling factors or negative dihedral force constants. Prior to this work, ACPYPE only converted AMBER topologies that used uniform, default 1–4 scaling factors and positive dihedral force constants. We demonstrate that the updated ACPYPE accurately transfers the GLYCAM06 force field from AMBER to GROMACS topology files, which employs non-uniform 1–4 scaling factors as well as negative dihedral force constants. Validation was performed using β-d-GlcNAc through gas-phase analysis of dihedral energy curves and probability density functions. The updated ACPYPE retains all of its original functionality, but now allows the simulation of complex glycomolecular systems in GROMACS using AMBER-originated force fields. ACPYPE is available for download at https://github.com/alanwilter/acpype.

In this contribution we present the concept for creating an “International Chair” position at a German University of Applied Sciences and our experiences in its first implementation. Our primary goal was to increase the diversity of the university’s teaching personalities and enrich student education by including content, methods, examples and experiences from other cultures. This gives students an international and intercultural learning experience that is otherwise only acquired through studying abroad. We conclude that the International Chair is a valuable and powerful university tool for increasing international exposure to the departments, their staff and students.

In this paper we present a new initiative to promote collaborative learning through industry partnered, interdisciplinary, student and user centred projects. This was achieved through the development of rehabilitation devices augmented with gamified software. Today development of software systems often requires people from different specialities who can work in multidisciplinary teams to achieve a common objective. A key challenge, therefore, is producing graduates with an understanding of a number of disparate skills across many discipline boundaries. Undergraduates may be knowledgeable in one specific discipline but will not be aware of the issues brought to bear by other relevant disciplines. In an effort to overcome this limitation, a cross-discipline course “Serious Games and Welfare Technology” was developed that allows students from different disciplines to work together to produce innovative, technology- supported health solutions. The course, an EU funded Erasmus+ initiative, was supported by a MOOC and enabled multi- disciplined and multinational teams to produce solutions for leading Health technology companies in the areas of rehabilitation and aging support. Following the first year of offering the course with a cohort of students from 5 countries, we report on the experiences and outcomes achieved from a number of viewpoints.