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The reciprocal translocation t(12;21)(p13;q22), the most common structural genomic alteration in B-cell precursor acute lymphoblastic leukaemia in children, results in a chimeric transcription factor TEL-AML1 (ETV6-RUNX1). We identified directly and indirectly regulated target genes utilizing an inducible TEL-AML1 system derived from the murine pro B-cell line BA/F3 and a monoclonal antibody directed against TEL-AML1. By integration of promoter binding identified with chromatin immunoprecipitation (ChIP)-on-chip, gene expression and protein output through microarray technology and stable labelling of amino acids in cell culture, we identified 217 directly and 118 indirectly regulated targets of the TEL-AML1 fusion protein. Directly, but not indirectly, regulated promoters were enriched in AML1-binding sites. The majority of promoter regions were specific for the fusion protein and not bound by native AML1 or TEL. Comparison with gene expression profiles from TEL-AML1-positive patients identified 56 concordantly misregulated genes with negative effects on proliferation and cellular transport mechanisms and positive effects on cellular migration, and stress responses including immunological responses. In summary, this work for the first time gives a comprehensive insight into how TEL-AML1 expression may directly and indirectly contribute to alter cells to become prone for leukemic transformation.
In this paper we present the steps towards a well-designed concept of a 5VR6 system for school experiments in scientific domains like physics, biology and chemistry. The steps include the analysis of system requirements in general, the analysis of school experiments and the analysis of input and output devices demands. Based on the results of these steps we show a taxonomy of school experiments and provide a comparison between several currently available devices which can be used for building such a system. We also compare the advantages and shortcomings of 5VR6 and 5AR6 systems in general to show why, in our opinion, 5VR6 systems are better suited for school-use.
Generating and visualizing large areas of vegetation that look natural makes terrain surfaces much more realistic. However, this is a challenging field in computer graphics, because ecological systems are complex and visually appealing plant models are geometrically detailed. This work presents Silva (System for the Instantiation of Large Vegetated Areas), a system to generate and visualize large vegetated areas based on the ecological surrounding. Silva generates vegetation on Wang-tiles with associated reusable distributions enabling multi-level instantiation. This paper presents a method to generate Poisson Disc Distributions (PDDs) with variable radii on Wang-tile sets (without a global optimization) that is able to generate seamless tilings. Because Silva has a freely configurable generation pipeline and can consider plant neighborhoods it is able to incorporate arbitrary abiotic and biotic components during generation. Based on multi-levelinstancing and nested kd-trees, the distributions on the Wang-tiles allow their acceleration structures to be reused during visualization. This enables Silva to visualize large vegetated areas of several hundred square kilometers with low render times and a small memory footprint.
Realism and plausibility of computer controlled entities in entertainment software have been enhanced by adding both static personalities and dynamic emotions. Here a generic model is introduced which allows the transfer of findings from real-life personality studies to a computational model. This information is used for decision making. The introduction of dynamic event-based emotions enables adaptive behavior patterns. The advantages of this new model have been validated with a four-way crossroad in a traffic simulation. Driving agents using the introduced model enhanced by dynamics were compared to agents based on static personality profiles and simple rule-based behavior. It has been shown that adding an adaptive dynamic factor to agents improves perceivable plausibility and realism. It also supports coping with extreme situations in a fair and understandable way.
Als Basis für Simulationen innerhalb virtueller Umgebungen werden meist unterliegende Semantiken benötigt. Im Fall von Verkehrssimulationen werden in der Regel definierte Verkehrsnetzwerke genutzt. Die Erstellung dieser Netzwerke wird meist per Hand durchgeführt, wodurch sie fehleranfällig ist und viel Zeit erfordert. Dieses Projekt wurde im Rahmen des AVeSi Projektes durchgeführt, in dem an der Entwicklung einer realistischen Verkehrssimulation für virtuelle Umgebung geforscht wird. Der im Projekt angestrebte Simulationsansatz basiert auf der Nutzung von zwei Komplexitätsebenen – einer mikroskopischen und einer mesoskopischen. Um einen Übergang zwischen den Simulationsebenen zu realisieren ist eine Verknüpfung der Verkehrsnetzwerke notwendig, was ebenfalls mit einem hohen Zeitaufwand verbunden ist. In diesem Bericht werden Modelle für Verkehrsnetzwerke beider Ebenen vorgestellt. Anschließend wird ein Ansatz beschrieben, der eine automatische Generierung und Verknüpfung von Verkehrsnetzwerken beider Modelle ermöglicht. Als Grundlage für die Generierung der Netzwerke dienen Daten im OpenDRIVE®-Format. Zur Evaluierung wurden wirklichkeitsgetreue OpenStreetMap-Daten, durch Verwendung einer Drittanbietersoftware, in OpenDRIVE®-Datensätze überführt. Es konnte nachgewiesen werden, dass es durch den Ansatz möglich ist, innerhalb weniger Minuten, große Verkehrsnetzwerke zu erzeugen, auf denen unmittelbar Simulationen ausgeführt werden können. Die Qualität der zur Evaluierung generierten Netzwerke reicht jedoch für Umgebungen, in denen ein hoher Realitätsgrad gefordert wird, nicht aus, was einen zusätzlichen Bearbeitungsschritt notwendig macht. Die Qualitätsprobleme konnten darauf zurückgeführt werden, dass der Detailgrad, der den Evaluierungsdaten zu Grunde liegenden OpenStreetMap-Daten, nicht hoch genug und der Überführungsprozess nicht ausreichend transparent ist.